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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900399.1_cds_XP_016450461.1_44911
CDS Infomation

[gene=LOC107775257] [db_xref=GeneID:107775257] [protein=endoglucanase 2-like] [protein_id=XP_016450461.1] [location=join(26878..27085,27169..27452,27539..27973,28310..28460,28555..28721,28851..29189)] [gbkey=CDS]
Sequence

ATGGAAAAGGAATCACCCAAGGATAAAAGATGGTTCTGGCGAGGGCTGGTCCTTTTTTCT
TTTGTGGCTTTCGTTCTTGCTGCGGTCTTATTTAGTTTTCGCAAATATTTTCATCGTTCT
GATTCTTCAAACGCTGATACAAACCAAGTTGTTAACAAATATGCAAATGCTCTTAGCATT
GCTATGCGATTCTTCGACGTTCAGAAGTCTGGAAAATTGGTGAATAATAAGATTGCTTGG
AGAGGAGATTCAGCTATGGGAGATGGAAGCGAAGCGAATTTGGATTTAACTAAAGGAATG
TTTGATGCTGGAGACCATGTGAAGTTTGGATTTCCAATGGCATTCACTGCAACTGTTTTA
TCATGGTCCATTTTGGAGTATGGCAACAACATGAAGTTGGTGAATGAGCTGGAAAATGCC
CACGAATCCCTCAAGTGGATAACTGATTTCCTTATTAATGCCCATCCTTCTGATAATGTC
CTCTATATTCAGGTGGGTGACCCAAAGCTGGATCACACTTGCTGGGAAAGACCTGAGGTT
ATGACACGGAAAAGGCCTCTCACACACGTGAATGCGACATATCCAGGGACAGATGTTGCA
GCTGAAACTGCAGCAGCAATGGCAGCTGCATCTTTGGTATTCGCGTCAATTGACTCTGCC
TACTCAGAGACTCTGCTTAAGCATGCCCAACAGTTATTCAAGTTTGCTGTTACTTATAGA
GGTTTGTACAGTATCAGTATACCTGGAGTGCAAGAATTTTATAATTCTACTGGATTTGGG
GATGAACTCTTGTGGGCAGCTGCCTGGCTTTATCATGCGACTGAAGAGAAATCTTACCTT
AGATATGTAACTACAAATGGCAACGCGTTTGCTAATTGGGGAAATCCATCTTGGTTTTCT
TGGGAAAATAAGTTGGCTGGAGTTCAGGTCCTACTATCAAGGGTCAATTTCTTTGGGTCA
AAGGAAGATATTTCAACAGAGGAAAGTCTTTCACTCCAGTTGTACAGACAAACTGCTGAA
ACCTTTTTGTGTGGACTTTTACCTGAATCCCCAACGGCAACCTCCCAAAGAACAGCAGAT
GGCCTAGTATGGGTTAACCAGTGGAATCCATTGCAGTATTCTGTGGCCTCTTCATTTTTG
GCAGTTGTTTACAGTGATTATATGCTTTGCTCCCAAACATCAAATTTATATTGCAGTGGG
GAGCTCTATGAACCAACAGAATTGCGCAACTTTGCAGTTTCACAGTTGGATTATATATTG
GGAAACAATCGAATGGAAATTAGCTACCTTGTTGGTTATGGAAGTAGATATCCTCAGCAA
GTTCACCACAGGGGTGCTTCAATTCCAGTAGATGATAATTCTAATTGCAGTGATGGCTTC
AAATGGCTTCATACAAGAGAACCTAATCCAAATGTTGCAGTGGGAGCTCTTGTTGGGGGA
CCATCCCTTAGTGATACATATATGGACTTTCGGAACAACATTTCCCAAAGTGAAACGACC
ACTTACAACAGTGCCCTTATTGTTGGACTCATCTCAGGCCTGATCACCTCTTCATCACAA
GTAGAGTCCTTTGTGAAAAACTGA

Peptide Sequence

PEP ID

XP_016450461.1
PEP Infomation

PREDICTED: endoglucanase 2-like [Nicotiana tabacum]
Sequence

MEKESPKDKRWFWRGLVLFSFVAFVLAAVLFSFRKYFHRSDSSNADTNQVVNKYANALSI
AMRFFDVQKSGKLVNNKIAWRGDSAMGDGSEANLDLTKGMFDAGDHVKFGFPMAFTATVL
SWSILEYGNNMKLVNELENAHESLKWITDFLINAHPSDNVLYIQVGDPKLDHTCWERPEV
MTRKRPLTHVNATYPGTDVAAETAAAMAAASLVFASIDSAYSETLLKHAQQLFKFAVTYR
GLYSISIPGVQEFYNSTGFGDELLWAAAWLYHATEEKSYLRYVTTNGNAFANWGNPSWFS
WENKLAGVQVLLSRVNFFGSKEDISTEESLSLQLYRQTAETFLCGLLPESPTATSQRTAD
GLVWVNQWNPLQYSVASSFLAVVYSDYMLCSQTSNLYCSGELYEPTELRNFAVSQLDYIL
GNNRMEISYLVGYGSRYPQQVHHRGASIPVDDNSNCSDGFKWLHTREPNPNVAVGALVGG
PSLSDTYMDFRNNISQSETTTYNSALIVGLISGLITSSSQVESFVKN

Transcript Sequence

Gene sequence data has not been registered.